Genetic variants and impacts

The FMO3 gene consists of nine exons, with the initial exon being non-coding. It encodes a polypeptide composed of 532 amino acid residues, and having a molecular mass of 60,047.

Mutations highlighted with red cause trimethylaminuria
E24D
E32K
I37T

H46N
R51G
A52T
V58I
N61S
N61K
E65R
M66I
P70L
M82T

N114S
D132H
V143E
G148X
H149Y
P153L
E158K

S173R
G180V
V187A
S195L
C197X
D198E
I199T
T201K
R205C

R223Q
R238Q
R238P
V257M
M260V

E305X
E308G
E314X
L360P
E362Q
R387L
W388X
G395E
K416I

K416N

G421V
M434I
I441T
Q470X
G475D
T488A
R492W
R500X

Comprehensive Table of Amino Acids: Properties and Characteristics

1 Letter code 3 Letter code Amino-acid name DNA Codons Essential or Not Properties
AAlaAlanineGCT, GCC, GCA, GCGNon-essentialNeutral, Nonpolar
CCysCysteineTGT, TGCNon-essentialNeutral, Polar
DAspAspartic AcidGAT, GACNon-essentialAcidic
EGluGlutamic AcidGAA, GAGNon-essentialAcidic
FPhePhenylalanineTTT, TTCEssentialAromatic
GGlyGlycineGGT, GGC, GGA, GGGNon-essentialNeutral, Nonpolar
HHisHistidineCAT, CACEssentialBasic, Aromatic
IIleIsoleucineATT, ATC, ATAEssentialNeutral, Nonpolar
KLysLysineAAA, AAGEssentialBasic
LLeuLeucineTTA, TTG, CTT, CTC, CTA, CTGEssentialNeutral, Nonpolar
MMetMethionineATGEssentialNeutral, Nonpolar
NAsnAsparagineAAT, AACNon-essentialNeutral, Polar
PProProlineCCT, CCC, CCA, CCGNon-essentialNeutral, Nonpolar
QGlnGlutamineCAA, CAGNon-essentialNeutral, Polar
RArgArginineCGT, CGC, CGA, CGG, AGA, AGGEssentialBasic
SSerSerineTCT, TCC, TCA, TCG, AGT, AGCNon-essentialNeutral, Polar
TThrThreonineACT, ACC, ACA, ACGEssentialNeutral, Polar
VValValineGTT, GTC, GTA, GTGEssentialNeutral, Nonpolar
WTrpTryptophanTGGEssentialAromatic
YTyrTyrosineTAT, TACEssentialAromatic

Deciphering Genetic Mutations: Understanding Notation and Its Impact on Protein Structure

Understanding genetic mutations and their effects on protein structure is crucial in molecular biology. The notation used to describe these mutations provides a standardized language for researchers and clinicians to communicate effectively.

For instance, the notation "c.1322T>C" denotes a specific change in the DNA sequence, where a thymine (T) is replaced by a cytosine (C) at position 1322. This alteration at the DNA level leads to changes in the corresponding amino acid sequence of the protein. For example, "p.(Ile441Thr)" or "I441T" indicates that isoleucine (Ile) at position 441 is replaced by threonine (Thr).

This concise notation facilitates accurate representation and interpretation of genetic variations, enhancing our understanding of their implications for protein function and disease.

Last updated : March 2024